Structural Classification of Proteins
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Superfamily: DNA polymerase beta-like, second domain

contains one classic and one pseudo HhH motifs

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: DNA polymerase beta-like, second domain [81585]
    contains one classic and one pseudo HhH motifs

Families:

  1. DNA polymerase beta-like, second domain [81584] (4)
    topological similarity to the N-terminal domain
    1. DNA polymerase beta [81579]
      1. Human (Homo sapiens) [TaxId: 9606] [81575] (103)
        1. 2fmp picpicxrefxref
          automatically matched to d1bpxa3
          complexed with dct, doc, mg, na
          1. region a:92-148 [133787] picpiclink
        2. 1tv9 picpicxrefxref
          complexed with mg, na, po4
          1. region a:92-148 [112676] picpiclink
        3. 2fms picpicxrefxref
          automatically matched to d1bpxa3
          complexed with cl, dup, mg, na
          1. region a:92-148 [133793] picpiclink
        4. 2i9g picpicxrefxref
          automatically matched to d1bpxa3
          complexed with bpi, cl, doc, na
          1. region a:92-148 [137127] picpiclink
        5. 2iso picpicxrefxref
          automatically matched to d1bpxa3
          complexed with cl, doc, gff, mg, na
          1. region a:92-148 [137607] picpiclink
        6. 2fmq picpicxrefxref
          automatically matched to d1bpxa3
          complexed with dup, mg, na
          1. region a:92-148 [133790] picpiclink
        7. 2isp picpicxrefxref
          automatically matched to d1bpxa3
          complexed with cl, doc, ggh, mg, na
          1. region a:92-148 [137610] picpiclink
        8. 1zjm picpicxrefxref
          automatically matched to d1bpxa3
          complexed with na
          1. region a:92-148 [125154] picpiclink
        9. 1tva picpicxrefxref
          complexed with mg, na, po4
          1. region a:92-148 [112679] picpiclink
        10. 2p66 picpicxrefxref
          automatically matched to d1bpxa3
          complexed with 3dr, na, po4
          1. region a:92-148 [139507] picpiclink
        11. 1bpy picpicxrefxref
          protein/DNA complex; complexed with dct, doc, mg, na
          1. region a:92-148 [75819] picpiclink
        12. 1zqa picpicxrefxref
          protein/DNA complex; complexed with k
          1. region a:92-148 [75935] picpiclink
        13. 9icx picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76131] picpiclink
        14. 9icw picpicxrefxref
          protein/DNA complex; complexed with na, so4
          1. region a:92-148 [76129] picpiclink
        15. 9ick picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76105] picpiclink
        16. 1zjn picpicxrefxref
          automatically matched to d1bpxa3
          complexed with dgt, mg, na
          1. region a:92-148 [125157] picpiclink
        17. 9icl picpicxrefxref
          protein/DNA complex; complexed with mn, na
          1. region a:92-148 [76107] picpiclink
        18. 8ico picpicxrefxref
          protein/DNA complex; complexed with azt, mn, na
          1. region a:92-148 [76062] picpiclink
        19. 7ici picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76008] picpiclink
        20. 9ico picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76113] picpiclink
        21. 9icm picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76109] picpiclink
        22. 7icv picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76034] picpiclink
        23. 1mq3 picpicxrefxref
          complexed with 8og, dcp, doc, mg, na
          1. region a:92-148 [79398] picpiclink
        24. 7ick picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76012] picpiclink
        25. 8ici picpicxrefxref
          protein/DNA complex; complexed with mg, na
          1. region a:92-148 [76050] picpiclink
        26. 7ich picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76006] picpiclink
        27. 7ict picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76030] picpiclink
        28. 7icq picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76024] picpiclink
        29. 1zqp picpicxrefxref
          protein/DNA complex; complexed with k
          1. region a:92-148 [75965] picpiclink
        30. 1zqi picpicxrefxref
          protein/DNA complex; complexed with k
          1. region a:92-148 [75951] picpiclink
        31. 8ick picpicxrefxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:92-148 [76054] picpiclink
        32. 7icn picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76018] picpiclink
        33. 7ice picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76000] picpiclink
        34. 9icv picpicxrefxref
          protein/DNA complex; complexed with dtp, na, zn
          1. region a:92-148 [76127] picpiclink
        35. 7icm picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76016] picpiclink
        36. 8ics picpicxrefxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:92-148 [76070] picpiclink
        37. 9icn picpicxrefxref
          protein/DNA complex; complexed with dct, mg, na
          1. region a:92-148 [76111] picpiclink
        38. 8icc picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76040] picpiclink
        39. 9icu picpicxrefxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:92-148 [76125] picpiclink
        40. 8icn picpicxrefxref
          protein/DNA complex; complexed with atp, mn, na
          1. region a:92-148 [76060] picpiclink
        41. 9ics picpicxrefxref
          protein/DNA complex; complexed with dct, mn, na
          1. region a:92-148 [76121] picpiclink
        42. 9icq picpicxrefxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:92-148 [76117] picpiclink
        43. 8icx picpicxrefxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:92-148 [76080] picpiclink
        44. 9icg picpicxrefxref
          protein/DNA complex; complexed with dcp, na, zn
          1. region a:92-148 [76097] picpiclink
        45. 9ich picpicxrefxref
          protein/DNA complex; complexed with dgt, na, zn
          1. region a:92-148 [76099] picpiclink
        46. 9icj picpicxrefxref
          protein/DNA complex; complexed with na, so4
          1. region a:92-148 [76103] picpiclink
        47. 8icp picpicxrefxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:92-148 [76064] picpiclink
        48. 8icr picpicxrefxref
          protein/DNA complex; complexed with dtp, mn, na
          1. region a:92-148 [76068] picpiclink
        49. 9icr picpicxrefxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:92-148 [76119] picpiclink
        50. 9ict picpicxrefxref
          protein/DNA complex; complexed with dgt, mn, na
          1. region a:92-148 [76123] picpiclink
        51. 8icq picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76066] picpiclink
        52. 7icr picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76026] picpiclink
        53. 7icg picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76004] picpiclink
        54. 7icp picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76022] picpiclink
        55. 1zqk picpicxrefxref
          protein/DNA complex; complexed with k
          1. region a:92-148 [75955] picpiclink
        56. 8icm picpicxrefxref
          protein/DNA complex; complexed with na, so4
          1. region a:92-148 [76058] picpiclink
        57. 8ica picpicxrefxref
          protein/DNA complex; complexed with ca, dtp, na
          1. region a:92-148 [76036] picpiclink
        58. 8icz picpicxrefxref
          protein/DNA complex; complexed with na, so4
          1. region a:92-148 [76084] picpiclink
        59. 9icc picpicxrefxref
          protein/DNA complex; complexed with cr, dtp, na
          1. region a:92-148 [76091] picpiclink
        60. 9icb picpicxrefxref
          protein/DNA complex; complexed with co, dtp, na
          1. region a:92-148 [76089] picpiclink
        61. 8icg picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76046] picpiclink
        62. 8icf picpicxrefxref
          protein/DNA complex; complexed with dtp, na
          1. region a:92-148 [76044] picpiclink
        63. 7ics picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76028] picpiclink
        64. 1zqf picpicxrefxref
          protein/DNA complex; complexed with cs
          1. region a:92-148 [75945] picpiclink
        65. 9icf picpicxrefxref
          protein/DNA complex; complexed with dtp, na, zn
          1. region a:92-148 [76095] picpiclink
        66. 9ica picpicxrefxref
          protein/DNA complex; complexed with mn, stp
          1. region a:92-148 [76087] picpiclink
        67. 1zqg picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [75947] picpiclink
        68. 1zqm picpicxrefxref
          protein/DNA complex; complexed with mn
          1. region a:92-148 [75959] picpiclink
        69. 1zqb picpicxrefxref
          protein/DNA complex; complexed with ba
          1. region a:92-148 [75937] picpiclink
        70. 8icb picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76038] picpiclink
        71. 7icf picpicxrefxref
          protein/DNA complex; complexed with cd, na
          1. region a:92-148 [76002] picpiclink
        72. 7icl picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76014] picpiclink
        73. 8icl picpicxrefxref
          protein/DNA complex; complexed with dtp, na, ni
          1. region a:92-148 [76056] picpiclink
        74. 1zqo picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [75963] picpiclink
        75. 8icu picpicxrefxref
          protein/DNA complex; complexed with dad, mn, na
          1. region a:92-148 [76074] picpiclink
        76. 8icv picpicxrefxref
          protein/DNA complex; complexed with dgt, mn, na
          1. region a:92-148 [76076] picpiclink
        77. 8icy picpicxrefxref
          protein/DNA complex; complexed with mn, na, ttp
          1. region a:92-148 [76082] picpiclink
        78. 9icy picpicxrefxref
          protein/DNA complex; complexed with na, so4
          1. region a:92-148 [76133] picpiclink
        79. 1zqn picpicxrefxref
          protein/DNA complex; complexed with ba
          1. region a:92-148 [75961] picpiclink
        80. 8ict picpicxrefxref
          protein/DNA complex; complexed with dcp, mn, na
          1. region a:92-148 [76072] picpiclink
        81. 1zqs picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [75971] picpiclink
        82. 1zql picpicxrefxref
          protein/DNA complex; complexed with mn
          1. region a:92-148 [75957] picpiclink
        83. 9icp picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76115] picpiclink
        84. 1zqc picpicxrefxref
          protein/DNA complex; complexed with ca
          1. region a:92-148 [75939] picpiclink
        85. 1mq2 picpicxrefxref
          complexed with 2da, 8og, a, na
          1. region a:92-148 [79395] picpiclink
        86. 1bpx picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [75817] picpiclink
        87. 7ico picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76020] picpiclink
        88. 8icj picpicxrefxref
          protein/DNA complex; complexed with na, ttp
          1. region a:92-148 [76052] picpiclink
        89. 9ici picpicxrefxref
          protein/DNA complex; complexed with na, zn
          1. region a:92-148 [76101] picpiclink
        90. 8ich picpicxrefxref
          protein/DNA complex; complexed with na
          1. region a:92-148 [76048] picpiclink
        91. 1zqq picpicxrefxref
          protein/DNA complex; complexed with mn, na
          1. region a:92-148 [75967] pic