Structural Classification of Proteins
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Fold: SAM domain-like

4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

Superfamilies:

  1. SAM/Pointed domain [47769] (2) picpic
  2. RuvA domain 2-like [47781] (5) picpic
    duplication: contains two helix-hairpin-helix (HhH) motifs
  3. C-terminal domain of RNA polymerase alpha subunit [47789] (1) picpic
    contains one classic and one pseudo HhH motifs
  4. Rad51 N-terminal domain-like [47794] (3) picpic
    contains one classic and one pseudo HhH motifs
  5. Barrier-to-autointegration factor, BAF [47798] (1) picpic
    contains one classic and one pseudo HhH motifs
  6. DNA polymerase beta, N-terminal domain-like [47802] (1) picpic
    contains one classic and one pseudo HhH motifs
  7. DNA polymerase beta-like, second domain [81585] (1) picpic
    contains one classic and one pseudo HhH motifs
  8. 5' to 3' exonuclease, C-terminal subdomain [47807] (1) picpic
  9. HRDC-like [47819] (4) picpic
  10. lambda integrase-like, N-terminal domain [47823] (1) picpic
  11. Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain [47831] (1) picpic
  12. Hypothetical protein YjbJ [69047] (1) picpic
  13. Putative methyltransferase TM0872, insert domain [81799] (1) picpic
  14. eIF2alpha middle domain-like [116742] (1) picpic
  15. YozE-like [140652] (1) picpic
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MRC site Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007
Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk