Structural Classification of Proteins
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Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Mouse (Mus musculus), cluster 1.1 [TaxId: 10090] [88524]

PDB Entry Domains:

  1. 1mju picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    complexed with gol
    1. region l:1-107 [91304] picpiclink
  2. 1ncw picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with bez, gol
    1. region l:1-107 [85557] picpiclink
  3. 1ruk picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with act, bez, gol
    1. region l:1-107 [97861] picpiclink
  4. 1rup picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with bez, gol
    1. region l:1-107 [97873] picpiclink
  5. 1dlf picpicxref
    part of anti-dansyl Fv
    complexed with so4
    1. chain l [20382] picpiclink
  6. 1rum picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with 4ht, bez, gol
    1. region l:1-107 [97869] picpiclink
  7. 2dlf picpicxref
    part of anti-dansyl Fv
    1. chain l [20384] picpiclink
  8. 1rur picpicxrefxrefxref
    part of Diels-Alder catalytic Fab 13G5
    complexed with zn
    1. region l:1-107 [97881] picpiclink
  9. 1mj8 picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    complexed with gol, po4
    1. region l:1-107 [91292] picpiclink
  10. 1qyg picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with bcg
    1. region l:1-107 [96591] picpiclink
  11. 1q72 picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with coc
    1. region l:1-107 [96016] picpiclink
  12. 1n4x picpicxref
    part of scFv 1695
    complexed with cl
    1. chain l [85326] picpiclink
    2. chain m [85327] picpiclink
  13. 1rua picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with 4ht, act, bez, ghg, gol
    1. region l:1-107 [97857] picpiclink
  14. 1jgu picpicxrefxrefxref
    part of catalytic Fab 1D4
    complexed with hbc, oh
    1. region l:1-107 [66690] picpiclink
  15. 1pz5 picpicxrefxrefxref
    part of Fab Sya/J6
    1. region a:1-107 [95401] picpiclink
  16. 1f3d picpicxrefxrefxref
    part of catalytic Fab 4B2
    complexed with so4, tpm
    1. region l:1-107 [20460] picpiclink
    2. region j:1-107 [20461] picpiclink
  17. 1jgv picpicxrefxrefxref
    part of catalytic Fab 1D4
    1. region l:1-107 [66694] picpiclink
  18. 1ruq picpicxrefxrefxref
    part of Diels-Alder catalytic Fab 13G5
    complexed with zn
    1. region l:1-107 [97877] picpiclink
  19. 1riu picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with rbe
    1. region l:1-107 [97520] picpiclink
  20. 1wz1 picpicxref
    automatically matched to d1dlfl_
    complexed with dns
    1. region l:1-113 [121477] picpiclink
  21. 1nqb picpicxref
    part of scFv trivalent antibody; N-terminal, VH domain is from B1-8 antibody (1A6U CH H); C-terminal, VL domain is from NQ11 antibody
    1. region a:121-233 [20043] picpiclink
    2. region c:121-233 [20045] picpiclink
  22. 1rul picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with 4ht, act, bez, ghg, gol
    1. region l:1-107 [97865] picpiclink
  23. 1mjj picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    complexed with hal, so4
    1. region a:1-107 [91294] picpiclink
    2. region l:1-107 [91300] picpiclink
  24. 1cr9 picpicxrefxrefxref
    part of anti-prion Fab 3F4
    1. region l:1-106a [20430] picpiclink
  25. 1yei picpicxrefxrefxref
    part of Fab D2.3
    complexed with pnp, zn
    1. region l:1-107 [20142] picpiclink
  26. 1yej picpicxrefxrefxref
    part of Fab D2.3
    complexed with pnp, zn
    1. region l:1-107 [20140] picpiclink
  27. 1a3l picpicxrefxrefxref
    part of Diels-Alder catalytic Fab 13G5
    complexed with cfc
    1. region l:1-107 [20240] picpiclink
  28. 1flr picpicxrefxrefxref
    part of Fab 4-4-20
    complexed with flu
    1. region l:1-112 [19904] picpiclink
  29. 1kn4 picpicxrefxrefxref
    part of Fab D2.3
    complexed with pde, zn
    1. region l:1-107 [72767] picpiclink
  30. 1kn2 picpicxrefxrefxref
    part of Fab D2.3
    complexed with pne, zn
    1. region l:1-107 [72762] picpiclink
  31. 1qkz picpicxrefxrefxrefxref
    part of Fab MN14C11.6
    1. region l:1-107 [20136] picpiclink
  32. 1yec picpicxrefxrefxref
    part of Fab D2.3
    complexed with pnb, zn
    1. region l:1-107 [20144] picpiclink
  33. 1hyx picpicxrefxrefxref
    part of hydrolytic antibody 6D9
    complexed with cpd
    1. region l:1-107 [20166] picpiclink
  34. 1rfd picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    1. region l:1-107 [97374] picpiclink
  35. 1mie picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    1. region l:1-107 [91283] picpiclink
  36. 1yeg picpicxrefxrefxref
    part of Fab D2.5
    complexed with act, bpn, zn
    1. region l:1-107 [20154] picpiclink
  37. 1f8t picpicxrefxrefxref
    part of anti-IL2 Fab LNKB-2
    1. region l:1-107 [59707] picpiclink
  38. 1riv picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with obe
    1. region l:1-107 [97524] picpiclink
  39. 1yef picpicxrefxrefxref
    part of Fab D2.5
    complexed with pnc, zn
    1. region l:1-107 [20152] picpiclink
  40. 1hyy picpicxrefxrefxref
    part of hydrolytic antibody 6D9
    complexed with cpd
    1. region l:1-107 [20168] picpiclink
  41. 1lo2 picpicxrefxrefxref
    part of retro Diels-Alder catalytic Fab 9D9
    complexed with ox1
    1. region x:1-112 [74127] picpiclink
    2. region l:1-112 [74125] picpiclink
  42. 1lo0 picpicxrefxrefxref
    part of retro Diels-Alder catalytic Fab 9D9
    complexed with bc1
    1. region x:1-112 [74119] picpiclink
    2. region l:1-112 [74117] picpiclink
  43. 1cfv picpicxref
    part of Fv 4155
    complexed with e3g, zn
    1. chain l [20160] picpiclink
  44. 1tet picpicxrefxrefxref
    part of Fab TE33
    complexed with cit
    1. region l:1-107 [19902] picpiclink
  45. 1l7t picpicxrefxrefxref
    part of anti-testosterone Fab 77
    1. region l:1-112 [77801] picpiclink
  46. 1bfv picpicxref
    part of Fv 4155
    complexed with stg, zn
    1. chain l [20162] picpiclink
  47. 1dsf picpicxref
    part of anticancer Fv B1; disulfide-stabilized
    mutant
    1. chain l [20246] picpiclink
  48. 1ub5 picpicxrefxrefxref
    part of blue fluorescent Fab 19G2
    complexed with spb
    1. region l:1-113 [99149] picpiclink
    2. region b:1-113 [99145] picpiclink
  49. 1yek picpicxrefxrefxref
    part of Fab D2.3
    complexed with pnp, zn
    1. region l:1-107 [20146] picpiclink
  50. 1kem picpicxrefxrefxref
    part of Fab 28B4
    1. region l:1-112 [20114] picpiclink
  51. 1mh5 picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    part of anti-testosterone Fab 77
    complexed with hal, so4
    1. region a:1-107 [91266] picpiclink
    2. region l:1-107 [91272] picpiclink
  52. 1fl5 picpicxrefxrefxref
    part of humanized catalytic Fab 28b4 with a sulfide oxidase activity
    complexed with so4; mutant
    1. region l:1-107 [65021] picpiclink
    2. region a:1-107 [65015] picpiclink
  53. 1mj7 picpicxrefxrefxref
    part of the esterolytic Fab ms6-164
    complexed with hal
    1. region l:1-107 [91288] picpiclink
  54. 1mre picpicxrefxrefxref
    part of Fab Jel 103
    complexed with gdp, imd, zn
    1. region l:1-108 [20018] picpiclink
  55. 1c1e picpicxrefxrefxref
    part of Diels-Alder catalytic Fab 1E9
    complexed with dmr, enh
    1. region l:1-112 [20238] picpiclink
  56. 1yee picpicxrefxrefxref
    part of Fab D2.5
    complexed with pnb
    1. region l:1-107 [20156] picpiclink
  57. 1keg picpicxrefxrefxref
    part of anti-photoproduct Fab 64M-2
    complexed with 64t, ni
    1. region l:1-107 [77347] picpiclink
  58. 1mrf picpicxrefxrefxref
    part of Fab Jel 103
    complexed with imd, oip, zn
    1. region l:1-108 [20020] picpiclink
  59. 1mrd picpicxrefxrefxref
    part of Fab Jel 103
    complexed with idp, imd, zn
    1. region l:1-108 [20016] picpiclink
  60. 2cgr picpicxrefxrefxref
    part of an anti-sweetener Fab
    complexed with gas
    1. region l:1-112 [19918] picpiclink
  61. 1axt picpicxrefxrefxref
    part of catalytic Fab 33F12 with an aldolase activity
    1. region l:1-107 [20304] picpiclink
  62. 1lo3 picpicxrefxrefxref
    part of retro Diels-Alder catalytic Fab 9D9
    complexed with an1
    1. region x:1-112 [74135] picpiclink
    2. region l:1-112 [74133] picpiclink
  63. 1t66 picpicxrefxrefxref
    complexed with flu
    1. region c:1-112 [106545] picpiclink
    2. region l:1-112 [106551] picpiclink
  64. 1ru9 picpicxrefxrefxref
    part of cationic cyclization catalytic Fab 4C6
    complexed with 4ht, act, bez, ghg, gol
    1. region l:1-107 [97853] picpiclink
  65. 1mrc picpicxrefxrefxref
    part of Fab Jel 103
    complexed with imd, so4, zn
    1. region l:1-108 [20022] picpiclink
  66. 1kel picpicxrefxrefxref
    part of Fab 28B4
    complexed with aah
    1. region l:1-112 [20112] picpiclink
  67. 1m7d picpicxrefxrefxref
    part of Fab specific for Y lipopolysaccharide
    complexed with 1na, raa, rae
    1. region a:1-108 [84861] picpiclink
  68. 1i9j picpicxrefxrefxref
    part of anti-testosterone Fab
    complexed with tes
    1. region l:1-112 [71146] picpiclink
  69. 1f90 picpicxrefxrefxref
    part of anti-IL2 Fab LNKB-2
    1. region l:1-107 [59711] picpiclink
  70. 2bfv picpicxref
    part of Fv 4155
    complexed with stg
    1. chain l [20164] picpiclink
  71. 1yeh picpicxrefxrefxref
    part of Fab D2.5
    complexed with zn
    1. region l:1-107 [20158] picpiclink
  72. 1ub6 picpicxrefxrefxref
    part of blue fluorescent Fab 19G2
    1. region l:2-113 [99157] picpiclink
    2. region b:2-113 [99153] picpiclink
  73. 1ehl picpicxrefxrefxref
    part of anti-photoproduct Fab 64M-2
    complexed with 5ht
    1. region l:1-107 [20502] picpiclink
  74. 2h1p picpicxrefxrefxref
    part of polysaccharide binding antibody 2H1
    1. region l:1-113 [20190] picpiclink
  75. 2pcp picpicxrefxrefxref
    part of Fab 6B5
    complexed with 1pc
    1. region a:1-107 [20370] picpiclink
    2. region c:1-107 [20372] picpiclink
  76. 1a4j picpicxrefxrefxref
    part of humanized Diels-Alder catalytic Fab; germline precursor
    1. region l:1-112 [20230] picpiclink
    2. region a:1-112 [20232] picpiclink
  77. 2mpa picpicxrefxrefxref
    part of bactericidal Fab MN12H2 against Neisseria meningitidis
    complexed with cd, cyf, thc
    1. region l:1-112 [20356] picpiclink
  78. 1igj picpicxrefxrefxref
    part of Fab 26-10
    complexed with dgx
    1. region a:1-107 [19818] picpic