Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Immunoglobulin-like beta-sandwich [48725]
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands
4. Superfamily: Immunoglobulin [48726]
5. Family: V set domains (antibody variable domain-like) [48727]
6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
7. Species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090] [88528]

PDB Entry Domains:

1. 1dqd
   part of Fab HGR-2 F6, a competitive antagonist of the glucagon receptor
   1. region l:1-106 [20440]
2. 1ay1
   part of Fab TP7 against Taq DNA polymerase
   1. region l:1-107 [20242]
3. 1qok
   part of anti-carcinoembryonic scFv MFE-23
   1. region a:162-267 [20493]
4. 1bgx
   part of Fab TP7 against Taq DNA polymerase
   1. region l:1-107 [20244]
5. 1for
   part of Fab 17-Ia
   1. region l:1-107 [19988]
6. 1bql
   part of Fab HyHEL-5
   part of Fab HyHEL-5
   1. region l:1-106 [19970]
7. 1yqv
   automatically matched to d1eo8l1
   1. region l:2-107 [123900]
8. 2bmk
   automatically matched to d1dqdl1
   complexed with iod, pdd
   1. region a:1-107 [128798]
9. 2bmk
   automatically matched to d1dqdl1
   complexed with iod, pdd
   1. region l:1-107 [128800]
10. 2b2x
    automatically matched to d1dqdl1
    complexed with mg; mutant
    1. region l:2-106 [127750]
11. 2b2x
    automatically matched to d1dqdl1
    complexed with mg; mutant
    1. region m:2-106 [127752]
12. 2j4w
    automatically matched to d1dqdl1
    mutant
    1. region l:3-107 [138007]
13. 1wcb
    automatically matched to d1dqdl1
    complexed with iod, pe1
    1. region a:1-107 [120882]
14. 1wcb
    automatically matched to d1dqdl1
    complexed with iod, pe1
    1. region l:1-107 [120884]
15. 1mim
    part of CD25-binding humanized Fab CHI621
    1. region l:1-105 [20128]
16. 1wc7
    automatically matched to d1dqdl1
    complexed with iod, pp3
    1. region a:1-107 [120878]
17. 1wc7
    automatically matched to d1dqdl1
    complexed with iod, pp3
    1. region l:1-107 [120880]
18. 1psk
    part of antibody against the melanoma associated gd2 ganglioside
    1. region l:1-106 [20138]
19. 1eo8
    part of Influenza virus hemagglutinin-neutralizing Fab BH151
    complexed with man, nag
    1. region l:1-106b [20294]
20. 1v7m
    part of anti-trombopoetin Fab tn1
    1. region l:1-107 [100454]
    2. region m:1-107 [100456]
21. 1baf
    part of Fab ANO2
    complexed with npp
    1. region l:1-108 [19778]
22. 2osl
    automatically matched to d1dqdl1
    1. region b:2-106 [139296]
23. 2osl
    automatically matched to d1dqdl1
    1. region l:2-106 [139298]
24. 1ots
    part of anti-CLC chloride channel Fab
    complexed with cl
    1. region d:1-106 [87419]
    2. region f:1-106 [87423]
25. 2iff
    part of Fab HyHEL-5
    mutant
    1. region l:1-106 [19972]
26. 2j5l
    automatically matched to d1dqdl1
    mutant
    1. region b:3-107 [138045]
27. 2fed
    automatically matched to d1dqdl1
    mutant
    1. region d:1-105 [133333]
28. 2fed
    automatically matched to d1dqdl1
    mutant
    1. region f:1-105 [133335]
29. 2ht4
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136738]
30. 2ht4
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136740]
31. 1v7n
    part of anti-trombopoetin Fab tn1
    mutant
    1. region l:1-107 [100468]
    2. region m:1-107 [100470]
    3. region n:1-107 [100472]
    4. region o:1-107 [100474]
32. 2exw
    automatically matched to d1dqdl1
    1. region d:1-105 [132568]
33. 2exw
    automatically matched to d1dqdl1
    1. region f:1-105 [132570]
34. 2htk
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136745]
35. 2htk
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136747]
36. 2h2p
    automatically matched to d1dqdl1
    complexed with sek
    1. region d:1-105 [136018]
37. 2h2p
    automatically matched to d1dqdl1
    complexed with sek
    1. region f:1-105 [136020]
38. 2ht3
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136734]
39. 2ht3
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136736]
40. 2htl
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136749]
41. 2htl
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136751]
42. 1ott
    part of anti-CLC chloride channel Fab
    complexed with cl; mutant
    1. region d:1-106 [87429]
    2. region f:1-106 [87433]
43. 2hlf
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136566]
44. 2hlf
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136568]
45. 2ht2
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136730]
46. 2ht2
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136732]
47. 2ez0
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [132606]
48. 2ez0
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [132608]
49. 2h2s
    automatically matched to d1dqdl1
    complexed with sek; mutant
    1. region d:1-105 [136024]
50. 2h2s
    automatically matched to d1dqdl1
    complexed with sek; mutant
    1. region f:1-105 [136026]
51. 2fec
    automatically matched to d1dqdl1
    mutant
    1. region l:1-105 [133329]
52. 2fec
    automatically matched to d1dqdl1
    mutant
    1. region o:1-105 [133331]
53. 1otu
    part of anti-CLC chloride channel Fab
    complexed with cl; mutant
    1. region d:1-106 [87439]
    2. region f:1-106 [87443]
54. 2exy
    automatically matched to d1dqdl1
    mutant
    1. region d:1-105 [132574]
55. 2exy
    automatically matched to d1dqdl1
    mutant
    1. region f:1-105 [132576]
56. 2fee
    automatically matched to d1dqdl1
    1. region l:1-105 [133339]
57. 2fee
    automatically matched to d1dqdl1
    1. region o:1-105 [133341]
58. 1rvf
    part of Fv 17-Ia
    1. chain l [19990]
59. 1sy6
    MQ P04940 P01837 # natural chimera
    1. region l:1-106 [106115]

Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007 Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk