Fold: Stringent starvation protein B, SspB

core: barrel, open; n*=4, S*=8; meander; SH3-like topology; some similarity to the Sm-like fold

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Stringent starvation protein B, SspB [101737]
   core: barrel, open; n*=4, S*=8; meander; SH3-like topology; some similarity to the Sm-like fold

Superfamilies:

1. Stringent starvation protein B, SspB [101738] (1)
   1. Stringent starvation protein B, SspB [101739] (2)
      1. Stringent starvation protein B, SspB [101740]
         a specificity-enhancing factor for the ClpXP proteolytic machine
         1. Escherichia coli [TaxId: 562] [101741] (6)
            1. 1yfn
               automatically matched to d1ox9a_
               1. region a:4-111 [123080]
            2. 1yfn
               automatically matched to d1ox9a_
               1. region b:5-111 [123081]
            3. 1yfn
               automatically matched to d1ox9a_
               1. region c:5-111 [123082]
            4. 1yfn
               automatically matched to d1ox9a_
               1. region d:5-111 [123083]
            5. 1ox8
               1. chain a [93671]
               2. chain b [93672]
            6. 1ox9
               complexed with a SsrA peptide; chains I, J, K, L, M, N, O and P
               1. chain a [93673]
               2. chain b [93674]
               3. chain c [93675]
               4. chain d [93676]
               5. chain e [93677]
               6. chain f [93678]
               7. chain g [93679]
               8. chain h [93680]
         2. Haemophilus influenzae [TaxId: 727] [101742] (5)
            1. 1ou8
               complexed with a SsrA peptide; chains C and D
               complexed with mg
               1. chain a [93543]
               2. chain b [93544]
            2. 1ou9
               complexed with ca
               1. chain a [93545]
               2. chain b [93546]
               3. chain c [93547]
            3. 1twb
               disulfide crosslinked to an SsrA degradation tag, chains C and D
               mutant
               1. chain a [112709]
               2. chain b [112710]
            4. 1zsz
               automatically matched to d1oula_
               complexed with mg; mutant
               1. region a:5-110 [125622]
            5. 1oul
               1. chain a [93549]
               2. chain b [93550]

Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007 Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk