Structural Classification of Proteins
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Superfamily: RuBisCo, C-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: RuBisCo, C-terminal domain [51649]

Families:

  1. RuBisCo, large subunit, C-terminal domain [51650] (12)
    N-terminal domain is alpha+beta
    1. Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651]
      1. Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097] [51652] (5) picpic
      2. Spinach (Spinacia oleracea) [TaxId: 3562] [51653] (11) picpic
      3. Galdieria partita [TaxId: 83374] [51654] (2) picpic
      4. Chlamydomonas reinhardtii [TaxId: 3055] [69403] (34) picpic
      5. Alcaligenes eutrophus [TaxId: 106590] [51655] (1) picpic
      6. Synechococcus sp., strain pcc 6301 [TaxId: 1131] [51656] (16) picpic
      7. Rhodospirillum rubrum [TaxId: 1085] [51657] (5) picpic
      8. Archaeon Thermococcus kodakaraensis [TaxId: 311400] [69404] (1) picpic
      9. Chlorobium tepidum [TaxId: 1097] [117389] (3) picpic
      10. Rice (Oryza sativa) [TaxId: 4530] [117390] (1) picpic
      11. Archaeon Halothiobacillus neapolitanus [TaxId: 927] [141849] (1) picpic
      12. Archaeon Pyrococcus horikoshii [TaxId: 53953] [141850] (10) picpic
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MRC site Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007
Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk