Structural Classification of Proteins
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Superfamily: Plexin repeat

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Trefoil/Plexin domain-like [57491]
    disulfide-rich fold; common core is alpha+beta with two conserved disulfides
  4. Superfamily: Plexin repeat [103575]

Families:

  1. Plexin repeat [103576] (3)
    Pfam 01437
    1. Semaphorin 4d [103577]
      1. Human (Homo sapiens) [TaxId: 9606] [103578] (1)
        1. 1olz picpicxrefxref
          1. region a:481-536 [93343] picpiclink
          2. region b:481-536 [93346] picpiclink
    2. Hepatocyte growth factor receptor [111407]
      1. Human (Homo sapiens) [TaxId: 9606] [111408] (2)
        1. 1shy picpicxrefxref
          mutant
          1. region b:516-564 [105566] picpiclink
        2. 1ssl picpic
          1. chain a [112113] picpiclink
    3. Integrin beta-3 [118249]
      1. Human (Homo sapiens) [TaxId: 9606] [118250] (7)
        1. 1txv picpicxrefxrefxrefxrefxrefxrefxref
          complexed with ca, cac, gol, man, mg, nag
          1. region b:1-57 [112786] picpiclink
        2. 1ty3 picpicxrefxrefxrefxrefxrefxrefxref
          complexed with ca, cac, gol, man, mg, nag
          1. region b:1-57 [112797] picpiclink
        3. 1ty6 picpicxrefxrefxrefxrefxrefxrefxref
          complexed with ca, gol, hrg, man, mg, mpt, nag, nh2
          1. region b:1-57 [112813] picpiclink
        4. 1ty5 picpicxrefxrefxrefxrefxrefxrefxref
          complexed with agg, ca, gol, man, mg, nag
          1. region b:1-57 [112805] picpiclink
        5. 1tye picpicxrefxrefxref
          complexed with ca, cac, man, mg, nag
          1. region b:1-57 [112832] picpiclink
          2. region d:1-57 [112836] picpiclink
          3. region f:1-57 [112840] picpiclink
        6. 1ty7 picpicxrefxrefxrefxrefxrefxrefxref
          complexed with 180, ca, gol, man, mg, nag
          1. region b:1-57 [112821] picpiclink
        7. 1u8c picpicxrefxrefxrefxrefxrefxref
          complexed with ca, nag
          1. region b:1001-1057 [113125] picpiclink
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MRC site Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007
Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk