Structural Classification of Proteins
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Family: PHD domain

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: FYVE/PHD zinc finger [57902]
    dimetal(zinc)-bound alpha+beta fold
  4. Superfamily: FYVE/PHD zinc finger [57903]
  5. Family: PHD domain [57911]

Protein Domains:

  1. Williams-Beuren syndrome transcription factor, WSTF [57912]
    1. Human (Homo sapiens) [TaxId: 9606] [57913] (1)
      1. 1f62 picpic
        complexed with zn
        1. chain a [45360] picpiclink
  2. Nuclear corepressor KAP-1 (TIF-1beta) [57914]
    1. Human (Homo sapiens) [TaxId: 9606] [57915] (1)
      1. 1fp0 picpic
        complexed with zn
        1. region a:19-88 [45361] picpiclink
  3. Mi2-beta (CHD4) [90226]
    chromodomain-helicase-DNA-binding protein 4
    1. Human (Homo sapiens) [TaxId: 9606] [90227] (2)
      1. 1mm3 picpic
        second PHD domain with the C-terminal loop replaced by the corresponding loop from WSTF
        complexed with zn
        1. chain a [85016] picpiclink
      2. 1mm2 picpic
        second PHD domain
        complexed with zn
        1. chain a [85015] picpiclink
  4. PHD finger protein At5g26210 [118328]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118329] (1)
      1. 1we9 picpic
        Structural genomics target
        complexed with zn
        1. chain a [114549] picpiclink
  5. PHD finger protein At1g33420 [118330]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118331] (1)
      1. 1wee picpic
        Structural genomics target
        complexed with zn
        1. chain a [114550] picpiclink
  6. Death associated transcription factor 1, Datf1 (DIO-1) [118332]
    1. Mouse (Mus musculus) [TaxId: 10090] [118333] (1)
      1. 1wem picpic
        Structural genomics target
        complexed with zn
        1. chain a [114559] picpiclink
  7. Inhibitor of growth protein 4, Ing4 [118334]
    1. Mouse (Mus musculus) [TaxId: 10090] [118335] (3)
      1. 1wen picpic
        Structural genomics target
        complexed with zn
        1. chain a [114560] picpiclink
      2. 1weu picpic
        Structural genomics target; the extra N-terminal region (168-187) is unstructured
        complexed with zn
        1. chain a [114565] picpiclink
      3. 2jmq picpic
        automatically matched to d1wena_
        complexed with zn
        1. region a:1-58 [138358] picpiclink
  8. PHD finger protein 8 [118336]
    1. Mouse (Mus musculus) [TaxId: 10090] [118337] (1)
      1. 1wep picpic
        Structural genomics target
        complexed with zn
        1. chain a [114562] picpiclink
  9. PHD finger protein 7 (NYD-SP6) [118338]
    1. Mouse (Mus musculus) [TaxId: 10090] [118339] (1)
      1. 1weq picpic
        Structural genomics target
        complexed with zn
        1. chain a [114563] picpiclink
  10. PHD Inhibitor of growth protein 2, Ing2 [118340]
    1. Mouse (Mus musculus) [TaxId: 10090] [118341] (1)
      1. 1wes picpic
        Structural genomics target
        complexed with zn
        1. chain a [114564] picpiclink
  11. PHD finger protein 22 [118342]
    1. Mouse (Mus musculus) [TaxId: 10090] [118343] (1)
      1. 1wev picpic
        Structural genomics target
        complexed with zn
        1. chain a [114566] picpiclink
  12. Sumoylation ligase E3, SIZ1 [118344]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [118345] (1)
      1. 1wew picpic
        Structural genomics target
        complexed with zn
        1. chain a [114567] picpiclink
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MRC site Generated from scop database 1.73 with scopm 1.101 on Wed Nov 21 11:18:32 2007
Copyright © 1994-2007 The scop authors / scop@mrc-lmb.cam.ac.uk